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​recent updates from the chase lab

microbial ecology and evolution
Featured update
Spring 2026

new methane-release field experiment underway!

The lab has begun a follow-up METEC methane-release experiment using a newly constructed test bed with baseline, disturbance-control, and early leak time points. This design lets us track how methane exposure, geochemistry, and microbial communities change through time.

field experiment methane biogeochemistry time series
site METEC · Colorado
01 baseline
02 release
03 response
CH4 gas release
O2 redox zone
DNA microbiomes
δ13C carbon cycling

recent highlights

June 2026
ASM Microbe presentation

Motahare gives a talk at ASM Microbe in DC

Motahare was selected to present her work on methane exposure from anthropogenic subsurface leaks in the session "Microbes and Climate: Drivers of Earth’s Resilience"

conferences student research methane environmental science
May 2026
Field setup for methane-release experiment

Motahare receives IOA award in NYC

Motahare traveled to New York City to receive her scholar award that supports talented Iranian students, scholars, and artists in their pursuit of graduate education in the United States

fellowship graduate students
April 2026
Ammara training students

Ammara promoted to permanent position

Ammara was promoted to Laboratory Operations Manager for the Biogeochemistry Research Group at SMU, primarily organizing and coordinating research across the Chase and LaRowe Labs

biogeochemistry organic chemistry

archive

2026

Spring 2026
Ammara SIO Visit

California training visits strengthen lab omics expertise

During Alex’s sabbatical in California, Ammara visited Scripps Institution of Oceanography to learn environmental metabolomics and molecular networking, while Motahare visited UC Irvine for hands-on training in next-generation sequencing. These visits expand the lab’s capacity to connect molecules, genomes, and microbial ecology.

SIO UC Irvine metabolomics sequencing
Jan. 2026
UCI biological sciences building

Alex started his sabbatical at UC Irvine

Alex is working with Jennifer Martiny and Alejandra Rodriguez-Verdugo on microbial ecological and evolutionary processes structuring environmental microbiomes.

microbiomes metagenomics evolution

2025

Nov. 2025
Octocoral terpene cyclase research

New paper in PNAS: Evolution of octocoral terpene cyclases

A new study led by Immo Burkhardt and an international team uncovers the evolutionary origins of terpene cyclase genes in octocorals. The Chase Lab contributed comparative genomics and evolutionary analyses showing that these biosynthetic capabilities trace back to the last common ancestor of octocorals more than 500 million years ago

PNAS octocorals terpene cyclases evolution
Sept. 2025
Metagenomic perspectives in microbial evolution

New metagenomic perspectives in microbial evolution

A new review in Current Opinion in Microbiology by Abby Simpson and colleagues highlights how metagenomic sequencing is transforming the study of evolution in natural microbial communities. The review discusses how mutation, selection, drift, and gene flow can be detected and interpreted from environmental sequencing data

review metagenomics microbial evolution
July 2025
New fieldwork season off and running

New fieldwork season off and running in Colorado

Motahare traveled to METEC in Fort Collins, Colorado, for the next round of field sampling. This time, the team is working with a newly constructed test bed for controlled natural gas release, giving us a rare opportunity to measure how methane, geochemistry, and microbial communities change from the start of the experiment.

global change fieldwork methane oxidation

2024

Aug. 2024
ISME19 presentation

Presenting data in South Africa

Alex presented a poster on a field manipulation of varying levels of diversity at ISME19 in South Africa. Main highlight was Jennifer Martiny being awarded the inaugural Winogradsky Award!

conference microbial evolution field experiment
June 2024
Marine natural products research

New marine natural products papers

Two new papers highlight marine natural product discovery. One examines the potential for marine Streptomyces lineage MAR4 to produce new natural products, and another uses non-invasive sampling in intertidal near-shore systems to discover new carbon skeletons

natural products marine microbiology chemical ecology
May 2024
SMU EENR Colloquium

Energy & Environment Colloquium

Organized the 2nd annual SMU Energy & Environment Colloquium with SMU School of Law and the Department of Civil and Environmental Engineering

energy environmental science environmental law
April 2024
Lab members presenting research

Chase Lab members present new data

Chase Lab members presented research at a range of conferences and symposia. Undergraduate student Ruhani presented work on methanogens and natural gas pipeline leaks, and Prof. Chase presented work on microbiome evolution at EGU in Vienna and gave an invited seminar at OSU Micro

conferences student research microbiomes

2023

Aug. 2023
Deep-sea sampling

Awarded NOAA grant with SIO/UCSD

Chase Lab received a NOAA grant along with collaborators at SIO/UCSD to investigate the biopharmaceutical potential of marine invertebrates and sediments in the deep-sea

NOAA deep-sea biopharmaceutical natural products
July 2023
Methane and soil carbon collaboration

New collaborations at SMU

A new collaboration with Dr. Kathleen Smits in SMU Engineering uses a multidisciplinary approach to understand carbon sources and sinks in soils, including methane mitigation from anthropogenic subsurface sources such as natural gas pipeline leaks

SMU methane soil carbon collaboration
April 2023
Microbial chemical ecology research

Chemical ecology and microbial community structure

New work in The ISME Journal investigates the role of biotic interactions in microbiome community structure by examining specialized metabolites and the distributions of their biosynthetic machinery. The work was also featured in an editorial in Nature Microbiology

ISME Journal chemical ecology community assembly
March 2023
Evolution and biogeochemistry papers

Evolution in biogeochemistry

Two new papers examine the importance of microbial evolution in environmental change and ecosystem function. One paper addresses microbial eco-evolutionary mechanisms in soil carbon models, and another proposes a framework for integrating evolution into microbiome-function relationships

evolution biogeochemistry soil carbon

2022

April 2022
Southern Methodist University campus

New position at SMU

Prof. Chase joined the Department of Earth Sciences at Southern Methodist University as part of a cluster hire focused on climate and atmospheric science. The lab focuses on microbial ecology and evolution in the context of biogeochemical cycling in environmental systems

SMU new lab earth sciences

2021

Nov. 2021
Natural products evolution paper

First natural products paper in mBio

New work examines how specialized metabolites and biosynthetic gene clusters evolve after acquisition. The study shows that biosynthetic gene clusters can be retained over evolutionary time through vertical inheritance, allowing evolutionary processes to generate new chemical diversity

mBio natural products BGC evolution
Aug. 2021
Cabrillo National Monument fieldwork

NIH R21 fieldwork at Cabrillo National Monument

Fieldwork began at Cabrillo National Monument in San Diego in collaboration with the National Park Service. The project uses a resin-capture technique to search for novel marine natural products from intertidal environments

fieldwork Cabrillo marine natural products
May 2021
Bacterial evolution reciprocal transplant experiment

New paper in PNAS

A large-scale reciprocal transplant experiment across a regional climate gradient was published in PNAS. The work examined bacterial evolutionary responses and community-level patterns in the Martiny Lab at UC Irvine

PNAS bacterial evolution climate gradient
March 2021
Dietary fiber CURE microbiome study

May the fiber be with you

Results from a course-based undergraduate research experience on dietary fiber and the gut microbiome were published. The study showed compositional shifts associated with dietary fiber intervention, including increases in fiber-degrading bacteria

CURE gut microbiome education

2019

Oct. 2019
Soil bacterial population structure research

Bacteria and sympatry

A new paper in mBio identified factors structuring the genetic diversity of a soil bacterium across spatial scales. The study found that bacterial populations are maintained by ecological specialization within localized microenvironments and by dispersal limitation between geographic locations

mBio microbial populations spatial ecology
Jan. 2019
Scripps Institution of Oceanography fellowship

New fellowship at Scripps Institution of Oceanography

Prof. Chase began a postdoctoral fellowship with Paul Jensen at Scripps Institution of Oceanography, integrating evolutionary biology into the discovery of marine natural products through a trait-based framework

SIO postdoctoral fellowship marine natural products
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